This study attempted to break the seed coat dormancy of Acacia nilotica, a riverine tree species, by simulating natural conditions. The effects of extended water soaking, soil burial and shade placement on seeds and pods were studied. Pods, clean-seeds and unclean-seeds were soaked in water for periods up to 24 weeks in two sites with or without forest soil. The seeds were sampled for germination every 3 weeks. The results showed that factors similar to that of the natural habitat had significant effect in breaking the seed dormancy. The length of soaking period of seeds in water was the most critical factor. Germination increased with the length of soaking time up to 18 weeks and then decreased. The 18 weeks is close to the average length of natural flooding period. Water treatment of seeds was suggested as alternative for the sulfuric acid treatment, which is expensive and hazardous.